Jupiter's Picross series
A series of nonogames spread across Nintendo platforms. Many feature characters from the Mario series, though this aspect has been dropped for the DS iteration. Jupiter Corporation's Picross games just feel a bit nicer than other company's: the hammer and chisel pointers, and the crunchy way they mark the board, is not quite matched elsewhere.
Games
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1996 - Picross 2
The second Game Boy version adds an unintrusive map, where players move between puzzles. Most puzzles are self-contained portions of larger puzzles: and it works!
1999–2000 - Picross NP
A series of 8 nonogame compilations released via the
Nintendo Power system. They feel squeakier than
Mario's Super Picross, but feature a wider variety of Nintendo, and non-Nintendo, themes. Also some interesting multiplayer modes.
2007 - Picross DS
DS version, where bigger puzzles include an unfortunate screen scrolling feature. Replaces the old-Nintendo Mario theme with the sterile new-Nintendo DS/Wii theme.
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2015 - Pokémon Picross
Overly drawn-out, free-to-play. You catch and equip 'mons which have different powers they can use to help you clear boards.
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Offshoots
2009 - Picross 3D
Version where puzzles are built in a 3-D grid. Made for the DS by
HAL.A sequal has since been released in Japan for the 3DS.
See Also
Picross e? - GameFAQs thread with some info on the
Picross e games (maybe incorporate later).